| | Mohammad Khanfar | Molecular Diversity (I.F. = 2.94) | | | 2022 |
| | Mohammad Khanfar, Saja Alqtaishat | Anti-cancer Agents in Medicinal Chemistry | 21 (16) (2278 – 2286). | Bentham | 2021 |
| | Mohammad A. Khanfar | Molecular Informatics (I.F. = 3.35) | doi.org/10.1002/minf.202100025 | | 2021 |
| | Bathini Thissera, Rizliya Visvanathan, Mohammad Khanfar, Mallique Qader, Marwa Hassan, Hossam Hassan, Majed Bawazeer, Fathy Behery, Mohammed Yaseen, Ruvini Liyanage, Mostafa Rateb | South African Journal of Botany (I.F. = 1.50) | 130, 282-299 | | 2020 |
| | Jens Hagenow, Stefanie Hagenow, Kathrin Grau, Mohammad Khanfar, Lena Hefke, Ewgenij Proschak Holger Stark | Drug Design, Development and Therapy (I.F. = 3.21) | 14, 371–393 | | 2020 |
| | Mohammad A. Khanfar, Saja Alqtaishat | Computational Biology and Chemistry (I.F. = 2.41) | 79, 147-154 | | 2019 |
| | Abeer Elmaidomy, Rabab Mohammed, Hossam M. Hassan, Asmaa I. Owis, Mostafa E. Rateb, Mohammad A. Khanfar, Markus Krischke, Martin J. Mueller, Usama Ramadan Abdelmohsen | Metabolites (I.F. = 3.30) | 9 (10), 223 | | 2019 |
| | Rasha Bashatwah, Mohammad A Khanfar, Sanaa Bardaweel | Journal of Molecular Recognition (I.F = 2.18) | 31(10): e2726 | | 2018 |
| | Mohammad A Khanfar, David Reiner, Stefanie Hagenow, Holger Stark | Bioorganic and Medicinal Chemistry (I.F. = 2.88) | 26 (14): 4034 – 4046 | | 2018 |
| | Seham S El-Hawary, Ahmed M Sayed, Rabab Mohammed, Mohammad Khanfar, Mostafa E Rateb, Tarek A Mohammed, Dina Hajjar, Hossam M Hassan, Tobias A. M Gulder, Usama Ramadan Abdelmohsen | Frontiers in Chemistry (I.F. = 4.16) | | | 2018 |
| | Sara Al-Marabeh, Enam Khalil, Mohammad A. Khanfar, Amal G. Al-Bakri, Muhammed Alzweiri | Pharmaceutical Development and Technology (I.F. = 1.95) | 22 (4): 578 – 586 | | 2017 |
| | Wafa A Mera, Malek Alzihlif, Mutasem O Taha, Mohammad A. Khanfar | Anti-Cancer Agents in Medicinal Chemistry (I.F. = 2.72) | 17(2):265-275 | | 2017 |
| | Mohammad A. Khanfar, Fahmy Banat, Shada Alabed, Saja Alqtaishat | Molecular Diversity (I.F. = 2.23) | 21: 187 | | 2017 |
| | Haneen Khaled Mohammad, Muhammed H. Alzweiri, Mohammad A Khanfar, Yusuf Al-Hiari | Medicinal Chemistry Research (I.F. = 1.61) | 26 (7): 1397 – 1404. | | 2017 |
| | Mohammad A Khanfar, Mutasem Taha | Journal of Molecular Recognition (I.F = 2.18) | 30(9): e2623 | | 2017 |
| | Nada Jarrar, Muhammed Alzweiri, Yusuf Al-Hiari, Shrouq Farah and Mohammad A Khanfar. | Letters in Drug Design & Discovery | 13(5): 401-410. | Bentham Science | 2016 |
| | Mohammad A. Khanfar, Anna Affini, Kiril Lutsenko, Katarina Nikolic,
Stefania Butini, Holger Stark | Frontiers in Neuroscience | 10, 1-17 | Frontiers | 2016 |
| | Mohammad A. Khanfar, Saja Al-Qtaishat, Maha Habash, Mutasem O. Taha | Chemico-Biological Interactions (I.F. = 3.30) | 254:93-101 | | 2016 |
| | Shada J. Alabed, Mohammad Khanfar, Mutasem O. Taha | Future Medicinal Chemistry (I.F. = 3.97) | 8(15):1841-1869 | | 2016 |
| | Alzweiri, M., Khanfar, M. A., Al-Hiari, Y. | Chromatographia | 78, 251–258 | springer | 2015 |
| | Khanfar, M. A., Quinti, L., Wang, H., Nobles, J., Kazantsev, A. J., Silverman, R. B | ACS Medicinal Chemistry Letters | 6, 607–611. | ACS | 2015 |
| | Jaradat, N. J, Khanfar, M. A., Habash, M., Taha, M. O. | Journal of Computer-Aided Molecular Design | 29, 561-581 | Springer | 2015 |
| | Khanfar, M. A., Bardaweel, S. K., Akl, M. R. El Sayed, K. A. | Phytotherapy Research | 29 (11):1776-82 | Elsevier | 2015 |
| | Abulateefeh SR, Khanfar MA, Al Bakain RZ, Taha MO | Pharm Dev Technol | 19(7), 856-67 | Informa Plc. | 2014 |
| | Mahmoud A. Al-Sha'er, Mohammed Khanfar, Mutasem O.Taha
| Journal of Molecular Modeling | 20(1), 2080 | Springer | 2014 |
| | Mohammad A. Khanfar, Luisa Quinti, Hua Wang, Soo Hyuk Choi, Aleksey G. Kazantsev, Richard B. Silverman | European Journal of Medicinal Chemistry | 76, 414 – 426. | ScienceDirect | 2014 |
| | Taha, M. O., Khanfar, M. A. | Medicinal Chemistry Research. | D.O.I: 10.1007/s00044-014-1168-9 | Springer | 2014 |
| | Taha, M. O., A.Al-Sha'er, M., Khanfar, M. A. | European Journal of Medicinal Chemistry | 84, 454–465 | Elsevier | 2014 |
| | Taha, M. O., Habash, M., Khanfar, M. A. | Journal of computer-aided molecular design | 28, 509-547 | Springer | 2014 |
| | Mohammed A. Khanfar and Khalid A. El Sayed | Medicinal Chemistry Research | 2, 4775–4786 | Springer | 2013 |
| | Mohammad A. Khanfar, Majed M. AbuKhader, Saja Alqtaishat, Mutasem O. Taha | Journal of Molecular Graphics and Modelling | 42, 39-49 | Springer | 2013 |
| | Vesna A. Eterovic, Angelie Del Valle-Rodriguez, Dinely Pérez, Marimée Carrasco, Mohammad A. Khanfar, Khalid A. El Sayed, Pedro A. Ferchmin. | Bioorganic and Medicinal Chemistry | 21, 4678–4686 | ScienceDirect | 2013 |
| | Muhammed Alzweiri, Ruba Tarawneh and Mohammad A. Khanfar | Journal of Separation Science | 36, 3200-3205 | Wiley Online Library | 2013 |
| | Khanfar MA, Taha MO | J Chem Inf Model | 53(10), 2587-612. | American Chemical Society | 2013 |
| | Hany N. Baraka, Mohammad A. Khanfar, John C. Williams, Emad M. El-Giar, Khalid A. El Sayed. | Planta Medica | 77, 467-76 | Thieme Medical Publishers | 2011 |
| | Hossam M. Hassan, Ahmed Y. Elnagar, Mohammad A. Khanfar, Asmaa A. Sallam, Rabab Mohammed, Lamiaa A. Shaala, Diaa T.A. Youssef, Mohamed S. Hifnawy, Khalid A. El Sayed. | European Journal of Medicinal Chemistry | 46, 1122-1130 | Elsevier | 2011 |
| | Mohammad A. Khanfar, Diaa T. A. Youssef, and Khalid A. El Sayed | ChemMedChem | 5, 274-285 | Wiley Online Library | 2010 |
| | Fatma M. AbdelBar, Mohammad A. Khanfar, Ahmed Y. Elnagar, Farid A. Badria, Ahmed M. Zaghloul, Kadria F. Ahmad, Paul W. Sylvester, Khalid A. El Sayed. | Bioorganic and Medicinal Chemistry | 18, 496–507 | ScienceDirect | 2010 |
| | Hossam M. Hassan. Mohammad A. Khanfar, Ahmed Y. Elnagar, Rabab Mohammed, Lamiaa A. Shaala, Diaa T. A. Youssef, Mohamed S. Hifnawy and Khalid A. El Sayed. | Journal of Natural Products | 73, 848–853 | American Chemical Society | 2010 |
| | Mohammad A. Khanfar, Diaa T.A. Youssef, and Khalid A. El Sayed. | European Journal of Medicinal Chemistry | 45, 3662-3668 | ScienceDirect | 2010 |
| | Mohammad A. Khanfar, Khalid El Sayed. | Europoean Journal of Medicinal Chemistry | 45, 5397-5405 | | 2010 |
| | Mohammad A. Khanfar, Ronald Hill, Amal Kaddoumi, Khalid A. El Sayed. | Journal of Medicinal Chemistry | 53, 8534–8545 | ScienceDirect | 2010 |
| | Ioana Abraham, Sandeep Jain, Chung-Pu Wu, Mohammad A. Khanfar, Yehong Kuang, Chun-Ling Dai, Zhi Shi, Xiang Chen, Liwu Fu, Suresh V. Ambudkar, Khalid El Sayed, Zhe-Sheng Chen | Biochemical Pharmacology | 80, 1497-506. | ScienceDirect | 2010 |
| | Mudit Mudit, Mohammad A. Khanfar, Anbalagan Muralidharan, Shibu Thomas, Girish Shah, Rob W. M. van Soest Khalid A. El Sayed. | Bioorganic and Medicinal Chemistry | 17, 1731–1738 | ScienceDirect | 2009 |
| | Girish V. Shah, Anbalagan Muralidharan, Shibu Thomas, Mitan Gokulgandhi, Mudit Mudit, Mohammad A. Khanfar, Khalid El Sayed. | Molecular Cancer Therapeutics | 8, 509-520 | AACRJournals.org | 2009 |
| | Mohammad A. Khanfar, Bilal Abu Asal, Mudit Mudit, Amal Kaddoumi, Khalid A. El Sayed. | Bioorganic and Medicinal Chemistry | 17, 6032–6039 | ScienceDirect | 2009 |
| | Fatma M. AbdelBar, Mohammad A. Khanfar, Ahmed Y. Elnagar, Hui Liu, Ahmed M. Zaghloul, Farid A. Badria, Paul W. Sylvester, Kadria F. Ahmad, Kevin P. Raisch, Khalid A. El Sayed. | Journal of Natural Products | 72, 1643–1650 | American Chemical Society | 2009 |
| | Khalid A. El Sayed, Mohammad A. Khanfar, Hassan M. Shallal, A.
Muralidharan, Bhushan Awate, Diaa T. A. Youssef, Yang Liu, Yu-Dong Zhou, Dale G. Nagle, Girish Shah. | Journal of Natural Products | 71, 396-402. | American Chemical Society
| 2008 |